We present a parallel algorithm for performing multipoint linkage analysis of genetic marker data on large family pedigrees. The algorithm effectively distributes both the computation and memory requirements of the analysis. We discuss an implementation of the algorithm in the Genehunter linkage ana
✦ LIBER ✦
npRmpi: A package for parallel distributed kernel estimation in R
✍ Scribed by Anson T. Y. Ho; Kim P. Huynh; David T. Jacho-Chávez
- Publisher
- John Wiley and Sons
- Year
- 2010
- Tongue
- English
- Weight
- 73 KB
- Volume
- 26
- Category
- Article
- ISSN
- 0883-7252
- DOI
- 10.1002/jae.1221
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✦ Synopsis
SOFTWARE REVIEW
6 Simply type vignette(''npRmpi'')at the R prompt and the vignette PDF file will automatically open. 7 The number of R instances launched is the number of slaves plus the master. For example, to launch two R instances, one should use the command mpi.spawn.Rslaves(nslavesD1). At least one slave is needed for npRmpi to work.
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