𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Normal mode analysis of protein dynamics

✍ Scribed by Case, David A.

Book ID
120067979
Publisher
Elsevier Science
Year
1994
Tongue
English
Weight
626 KB
Volume
4
Category
Article
ISSN
0959-440X

No coin nor oath required. For personal study only.

πŸ“œ SIMILAR VOLUMES

A comparative study of dynamic structure
A comparative study of dynamic structures between phage 434 Cro and repressor proteins by normal mode analysis
✍ Wako, Hiroshi; Tachikawa, Masanori; Ogawa, Atsushi πŸ“‚ Article πŸ“… 1996 πŸ› John Wiley and Sons 🌐 English βš– 980 KB

T w o DNA binding proteins, Cro and the amino-terminal domain of the repressor of bacteriophage 434 (434 Cro and 434 repressor) that regulate gene expression and contain a helix-turn-helix (HTH) motif responsible for their site-specific DNA recognition adopt very similar three-dimensional structures

Model-free methods of analyzing domain m
Model-free methods of analyzing domain motions in proteins from simulation: A comparison of normal mode analysis and molecular dynamics simulation of lysozyme
✍ Steven Hayward; Akio Kitao; Herman J.C. Berendsen πŸ“‚ Article πŸ“… 1997 πŸ› John Wiley and Sons 🌐 English βš– 185 KB πŸ‘ 3 views

Model-free methods are introduced to determine quantities pertaining to protein domain motions from normal mode analyses and molecular dynamics simulations. For the normal mode analysis, the methods are based on the assumption that in low frequency modes, domain motions can be well approximated by m

Conformational dynamics of polypeptides
Conformational dynamics of polypeptides and proteins in the dihedral angle space and in the cartesian coordinate space: Normal mode analysis of deca-alanine
✍ Akio Kitao; Nobuhiro Gō πŸ“‚ Article πŸ“… 1991 πŸ› John Wiley and Sons 🌐 English βš– 882 KB

Effects of different treatments of the degrees of freedom of bond length stretching and bond angle bending in computational analysis of conformational dynamics of proteins and polypeptides are assessed. More specifically, the normal mode analysis of conformational dynamics of a-helix of deca-alanine