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New invariant of DNA sequence based on 3DD-curves and its application on phylogeny

✍ Scribed by Xizhen Zhang; Jiawei Luo; Li Yang

Publisher: John Wiley and Sons
Year: 2007
Tongue: English
Weight: 151 KB
Volume: 28
Category: Article
ISSN: 0192-8651
DOI: 10.1002/jcc.20760

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✦ Synopsis

Abstract

The Z_inv, a new invariant based on 3DD‐curves of DNA sequence, which is simple for calculation and it approximates to the leading eigenvalues of the matrix associated with DNA sequence. The utility of our invariant is illustrated on the DNA sequence of 11 species. In this study, we use the Z_inv to analyze the phylogenetic relationships for the seven HA (H5N1) sequences of avian influenza virus. © 2007 Wiley Periodicals, Inc. J Comput Chem 2007

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