✦ LIBER ✦

NDesign: software for study design for the detection of rare variants from next-generation sequencing data

✍ Scribed by Sugaya, Yuki; Akazawa, Yasuaki; Saito, Akira; Kamitsuji, Shigeo

Book ID: 120400533
Publisher: Nature Publishing Group
Year: 2012
Tongue: English
Weight: 154 KB
Volume: 57
Category: Article
ISSN: 1435-232X
DOI: 10.1038/jhg.2012.81

No coin nor oath required. For personal study only.

📜 SIMILAR VOLUMES

Performance of Common Analysis Methods f

Performance of Common Analysis Methods for Detecting Low-Frequency Single Nucleotide Variants in Targeted Next-Generation Sequence Data

✍ Spencer, David H.; Tyagi, Manoj; Vallania, Francesco; Bredemeyer, Andrew J.; Pfe 📂 Article 📅 2014 🏛 American Society for Investigative Pathology 🌐 English ⚖ 954 KB

Assessment of genetic variation for the

Assessment of genetic variation for the LINE-1 retrotransposon from next generation sequence data

✍ Eric Rouchka; Diego E Montoya-Durango; Vilius Stribinskis; Kenneth Ramos; Ted Ka 📂 Article 📅 2010 🏛 BioMed Central 🌐 English ⚖ 450 KB

Tag-Based Next Generation Sequencing (KA

Tag-Based Next Generation Sequencing (KAHL:TAG BASED SEQUENCING O-BK) || Computational Methods for the Identification of MicroRNAs from Small RNA Sequencing Data

✍ Harbers, Matthias; Kahl, Günter 📂 Article 📅 2012 🏛 Wiley-VCH Verlag GmbH & Co. KGaA 🌐 German ⚖ 179 KB

Tag-based approaches were originally designed to increase the throughput of capillary sequencing, where concatemers of short sequences were first used in expression profiling. New Next Generation Sequencing methods largely extended the use of tag-based approaches as the tag lengths perfectly match w

The Linkage Method: A Novel Approach for

The Linkage Method: A Novel Approach for SNP Detection and Haplotype Reconstruction from a Single Diploid Individual Using Next-Generation Sequence Data

✍ Sasaki, E.; Sugino, R. P.; Innan, H. 📂 Article 📅 2013 🏛 Oxford University Press 🌐 English ⚖ 888 KB

A fast collapsed data method for estimat

A fast collapsed data method for estimating haplotype frequencies from pooled genotype data with applications to the study of rare variants

✍ Anthony Y.C. Kuk; Xiang Li; Jinfeng Xu 📂 Article 📅 2012 🏛 John Wiley and Sons 🌐 English ⚖ 261 KB

A Toolkit for bulk PCR-based marker desi

A Toolkit for bulk PCR-based marker design from next-generation sequence data: application for development of a framework linkage map in bulb onion (Allium cepaL.)

✍ Baldwin, Samantha; Revanna, Roopashree; Thomson, Susan; Pither-Joyce, Meeghan; W 📂 Article 📅 2012 🏛 BioMed Central 🌐 English ⚖ 540 KB