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Molecular simulation of the primary and secondary structures of the Aβ(1-42)-peptide of Alzheimer's disease

✍ Scribed by Peter P. Mager


Publisher
John Wiley and Sons
Year
1998
Tongue
English
Weight
583 KB
Volume
18
Category
Article
ISSN
0198-6325

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✦ Synopsis


The major protein constituent of the deposits of Alzheimer's disease is the so-called amyloid ␤-peptide (A␤) which was derived from proteolysis of a large transmembrane amyloid precursor protein. Some physicochemical and biological properties of the A␤(1-42) peptide are described in this paper. Three functional areas of the soluble A␤(1-42) peptide were found: (i) a lipophilic region in the middle of the peptide (Lys16 to Ala21), (ii) a second lipophilic core at the end (Lys28 to Val40), and (iii) polarized and charged, solvent-exposed areas. Using molecule coordinates found experimentally by NMR-solution spectroscopy, subsequent Gasteiger-MM ϩ geometry optimization led to the result that the first lipophilic core has an ␣-helical structure which is stabilized by intramolecular hydrogen-bonding forces. The result is a loop-like molecule. The second lipophilic core has a ␤-sheet structure, and is able to form long-ranged, noncovalent, mainly hydrophobic forces with other ␤-sheets of A␤ peptides. The ␤-strands run in an antiparallel direction. The aggregates are highly stable and ordered. The negatively charged, solvent-exposed residues are potential sites for a crosslinking with membrane-bound receptors. A perspective in drug research is the development of drugs that bind to individual ␤sheets by noncovalent interactions, blocking the associations between the individual A␤ peptides and preventing the formation of amyloid aggregates.


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