𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Molecular dynamics simulations of xDNA

✍ Scribed by Mathew K. Varghese; Renjith Thomas; N. V. Unnikrishnan; C. Sudarsanakumar


Publisher
Wiley (John Wiley & Sons)
Year
2009
Tongue
English
Weight
394 KB
Volume
91
Category
Article
ISSN
0006-3525

No coin nor oath required. For personal study only.


πŸ“œ SIMILAR VOLUMES


Molecular dynamics simulations of biomem
✍ G. Vergoten πŸ“‚ Article πŸ“… 1998 πŸ› John Wiley and Sons 🌐 English βš– 119 KB πŸ‘ 2 views

A molecular force field dedicated to molecular dynamics simulation of biomembranes was developed. It was parameterized on model compounds related to phospholipids and was able to reproduce at the same time structures, energies, and vibrational spectra. Cross terms in the potential energy function we

Molecular dynamics simulations of Ξ²-hair
✍ Hongwu Wang; Judith Varady; Lily Ng; Shen-Shu Sung πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 252 KB πŸ‘ 1 views

Molecular dynamics simulations of ␀-hairpin folding have been carried out with a solvent-referenced potential at 274 K. The model peptide V 4 D PGV 4 formed stable ␀-hairpin conformations and the ␀-hairpin ratio calculated by the DSSP algorithm was about 56% in the 50-ns simulation. Folding into ␀-h

Molecular dynamics simulations of HPr un
✍ Muriel Canalia; ThΓ©rΓ¨se E. Malliavin πŸ“‚ Article πŸ“… 2004 πŸ› Wiley (John Wiley & Sons) 🌐 English βš– 381 KB πŸ‘ 1 views

## Abstract The histidine‐containing protein (HPr) plays an important role in the phosphotransferase system (PTS). The deformations induced on the protein structure at high hydrostatic pressure values (4, 50, 100, 150, and 200 MPa) were previously (H. Kalbitzer, A. GΓΆrler, H. Li, P. Dubovskii, A. H

Molecular dynamics simulation of truncat
✍ Saurabh Kumar Shakya; Wei Gu; Volkhard Helms πŸ“‚ Article πŸ“… 2005 πŸ› Wiley (John Wiley & Sons) 🌐 English βš– 497 KB

## Abstract The 128 amino acid long soluble protein adrenodoxin (Adx) is a typical member of the ferredoxin protein family that are electron carrier proteins with an iron–sulfur cofactor. Adx carries electrons from adrenodoxin reductase (AdR) to cytochrome P450s. Its binding modes to these proteins

Study of the electrostatics treatment in
✍ Robert Garemyr; Arne Elofsson πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 355 KB πŸ‘ 2 views

This article considers the treatment of long-range interactions in molecular dynamics simulations. We investigate the effects of using different cutoff distances, constant versus distancedependent dielectric, and different smoothing methods. In contrast to findings of earlier studies, we find that i