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Massively Parallel Evolutionary Computation on GPGPUs

✍ Scribed by Pierre Collet (auth.), Shigeyoshi Tsutsui, Pierre Collet (eds.)


Publisher
Springer-Verlag Berlin Heidelberg
Year
2013
Tongue
English
Leaves
454
Series
Natural computing series
Edition
1
Category
Library

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✦ Synopsis


Evolutionary algorithms (EAs) are metaheuristics that learn from natural collective behavior and are applied to solve optimization problems in domains such as scheduling, engineering, bioinformatics, and finance. Such applications demand acceptable solutions with high-speed execution using finite computational resources. Therefore, there have been many attempts to develop platforms for running parallel EAs using multicore machines, massively parallel cluster machines, or grid computing environments. Recent advances in general-purpose computing on graphics processing units (GPGPU) have opened up this possibility for parallel EAs, and this is the first book dedicated to this exciting development.

The three chapters of Part I are tutorials, representing a comprehensive introduction to the approach, explaining the characteristics of the hardware used, and presenting a representative project to develop a platform for automatic parallelization of evolutionary computing (EC) on GPGPUs. The 10 chapters in Part II focus on how to consider key EC approaches in the light of this advanced computational technique, in particular addressing generic local search, tabu search, genetic algorithms, differential evolution, swarm optimization, ant colony optimization, systolic genetic search, genetic programming, and multiobjective optimization. The 6 chapters in Part III present successful results from real-world problems in data mining, bioinformatics, drug discovery, crystallography, artificial chemistries, and sudoku.

Although the parallelism of EAs is suited to the single-instruction multiple-data (SIMD)-based GPU, there are many issues to be resolved in design and implementation, and a key feature of the contributions is the practical engineering advice offered. This book will be of value to researchers, practitioners, and graduate students in the areas of evolutionary computation and scientific computing.

✦ Table of Contents


Front Matter....Pages i-xii
Front Matter....Pages 1-1
Why GPGPUs for Evolutionary Computation?....Pages 3-14
Understanding NVIDIA GPGPU Hardware....Pages 15-34
Automatic Parallelization of EC on GPGPUs and Clusters of GPGPU Machines with EASEA and EASEA-CLOUD....Pages 35-59
Front Matter....Pages 61-61
Generic Local Search (Memetic) Algorithm on a Single GPGPU Chip....Pages 63-81
arGA: Adaptive Resolution Micro-genetic Algorithm with Tabu Search to Solve MINLP Problems Using GPU....Pages 83-104
An Analytical Study of Parallel GA with Independent Runs on GPUs....Pages 105-120
Many-Threaded Differential Evolution on the GPU....Pages 121-147
Scheduling Using Multiple Swarm Particle Optimization with Memetic Features on Graphics Processing Units....Pages 149-178
ACO with Tabu Search on GPUs for Fast Solution of the QAP....Pages 179-202
New Ideas in Parallel Metaheuristics on GPU: Systolic Genetic Search....Pages 203-225
Genetic Programming on GPGPU Cards Using EASEA....Pages 227-248
Cartesian Genetic Programming on the GPU....Pages 249-266
Implementation Techniques for Massively Parallel Multi-objective Optimization....Pages 267-286
Data Mining Using Parallel Multi-objective Evolutionary Algorithms on Graphics Processing Units....Pages 287-307
Front Matter....Pages 309-309
Large-Scale Bioinformatics Data Mining with Parallel Genetic Programming on Graphics Processing Units....Pages 311-347
GPU-Accelerated High-Accuracy Molecular Docking Using Guided Differential Evolution....Pages 349-367
Using Large-Scale Parallel Systems for Complex Crystallographic Problems in Materials Science....Pages 369-387
Artificial Chemistries on GPU....Pages 389-419
Acceleration of Genetic Algorithms for Sudoku Solution on Many-Core Processors....Pages 421-444
Back Matter....Pages 445-453

✦ Subjects


Artificial Intelligence (incl. Robotics); Computational Intelligence; Theory of Computation; Computer Systems Organization and Communication Networks; Electrical Engineering


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