𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Localisation and dynamics of sodium counterions around DNA in solution from molecular dynamics simulation

✍ Scribed by Alexandre M.J.J. Bonvin

Publisher
Springer
Year
2000
Tongue
English
Weight
171 KB
Volume
29
Category
Article
ISSN
1432-1017

No coin nor oath required. For personal study only.

πŸ“œ SIMILAR VOLUMES

Ion clustering in molecular dynamics sim
Ion clustering in molecular dynamics simulations of sodium iodide solutions
✍ Vilia Ann Payne; Jian-Hua Xu; Maria Forsyth; Mark A. Ratner; Duward F. Shriver; πŸ“‚ Article πŸ“… 1995 πŸ› Elsevier Science 🌐 English βš– 468 KB

Model systems of sodium iodide dissolved in dimethyl ether or 1,Zdimethoxyethane (glyme) were studied in order to investigate the structural and dynamic properties of ionic solutions in small and polymeric ethers. Full molecular dynamics simulations were performed at a range of different salt concen

Molecular dynamics simulation of a polym
Molecular dynamics simulation of a polymer chain in solution by collisional dynamics method
✍ LEMAK, A. S.; BALABAEV, N. K. πŸ“‚ Article πŸ“… 1996 πŸ› John Wiley and Sons 🌐 English βš– 834 KB

This article describes the collisional dynamics (CD) method adapted for molecules with geometrical constraints within a description using Cartesian coordinates for the atoms. In the CD method, stochastic collisions with virtual particles are included in usual molecular dynamics simulations to couple

Molecular dynamics simulations of papill
Molecular dynamics simulations of papilloma virus E2 DNA sequences: Dynamical models for oligonucleotide structures in solution
✍ K. Suzie Byun; D. L. Beveridge πŸ“‚ Article πŸ“… 2004 πŸ› Wiley (John Wiley & Sons) 🌐 English βš– 333 KB

## Abstract The specificity of papilloma virus E2 protein–DNA binding depends critically upon the sequence of a region of the DNA not in direct contact with the protein, and represents one of the simplest known examples of indirect readout. A detailed characterization of this system in solution is