Interactive elements for dynamically linked multiple representations in computer simulations

Development of hardware accelerator for

Development of hardware accelerator for molecular dynamics simulations: A computation board that calculates nonbonded interactions in cooperation with fast multipole method

✍ Takashi Amisaki; Shinjiro Toyoda; Hiroh Miyagawa; Kunihiro Kitamura 📂 Article 📅 2003 🏛 John Wiley and Sons 🌐 English ⚖ 302 KB

## Abstract Evaluation of long‐range Coulombic interactions still represents a bottleneck in the molecular dynamics (MD) simulations of biological macromolecules. Despite the advent of sophisticated fast algorithms, such as the fast multipole method (FMM), accurate simulations still demand a great