๐”– Bobbio Scriptorium
โœฆ   LIBER   โœฆ

Improving the flexible molecular fitting technique using distance matrices

โœ Scribed by J. Lejeune; A. Michel; D. P. Vercauteren


Publisher
John Wiley and Sons
Year
1986
Tongue
English
Weight
476 KB
Volume
7
Category
Article
ISSN
0192-8651

No coin nor oath required. For personal study only.

โœฆ Synopsis


A new program for the molecular superposition of flexible molecules, IFMFIT (Improved or Interactive Flexible Molecular Fit), is presented. The essential new feature involves a complete revision of the representation of molecular structures making use of the briefly discussed Distance Matrix algorithm. A comparison is given between the input mode required by the original FMFIT program and that of our version as exemplified by the superposition of (R)-chrysanthemic acid and (S)-3-methyl-2-(parachloropheny1)-butyric acid. This example demonstrates the superiority and the user-interactive character made possible by our IFMFIT version.


๐Ÿ“œ SIMILAR VOLUMES


Using multistate free energy techniques
โœ Mikolai Fajer; Robert V. Swift; J. Andrew McCammon ๐Ÿ“‚ Article ๐Ÿ“… 2009 ๐Ÿ› John Wiley and Sons ๐ŸŒ English โš– 157 KB

## Abstract Replica exchange accelerated molecular dynamics (REXAMD) is a method that enhances conformational sampling while retaining at least one replica on the original potential, thus avoiding the statistical problems of exponential reweighting. In this article, we study three methods that can