✦ LIBER ✦

Improved detection of homologous membrane proteins by inclusion of information from topology predictions

✍ Scribed by Maria Hedman; Hans Deloof; Gunnar Von Heijne; Arne Elofsson

Book ID: 111753374
Publisher: Cold Spring Harbor Laboratory Press
Year: 2009
Tongue: English
Weight: 66 KB
Volume: 11
Category: Article
ISSN: 0961-8368
DOI: 10.1110/ps.39402

No coin nor oath required. For personal study only.

📜 SIMILAR VOLUMES

A new decoding algorithm for hidden Mark

A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins

✍ Piero Fariselli; Pier Luigi Martelli; Rita Casadio 📂 Article 📅 2005 🏛 BioMed Central 🌐 English ⚖ 267 KB

Improved identification of outer membran

Improved identification of outer membrane beta barrel proteins using primary sequence, predicted secondary structure, and evolutionary information

✍ Marcin J. Mizianty; Lukasz Kurgan 📂 Article 📅 2010 🏛 John Wiley and Sons 🌐 English ⚖ 243 KB

## Abstract Membrane proteins (MPs) are difficult to identify in genomes and to crystallize, making it hard to determine their tertiary structures. MPs could be categorized into α‐helical (AMP) and outer membrane proteins which mostly include beta barrel folds (OMBBs). The AMPs are relatively easy

Rational protein engineering and industr

Rational protein engineering and industrial application: structure prediction by homology and rational design of protein-variants with improved ‘washing performance’ — the alkaline protease from Bacillus alcalophilus

✍ W. Aehle; H. Sobek; A. Amory; R. Vetter; D. Wilke; D. Schomburg 📂 Article 📅 1993 🏛 Elsevier Science 🌐 English ⚖ 647 KB

Multi-level learning: improving the pred

Multi-level learning: improving the prediction of protein, domain and residue interactions by allowing information flow between levels

✍ Kevin Y Yip; Philip M Kim; Drew McDermott; Mark Gerstein 📂 Article 📅 2009 🏛 BioMed Central 🌐 English ⚖ 914 KB

Predicting membrane protein types by inc

Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou’s pseudo amino acid composition

✍ Chen, Yen-Kuang; Li, Kuo-Bin 📂 Article 📅 2013 🏛 Elsevier Science 🌐 English ⚖ 884 KB

Detection of the associated state of mem

Detection of the associated state of membrane proteins by polyacrylamide gradient gel electrophoresis with non-denaturing detergents Application to band 3 protein from erythrocyte membranes

✍ Hiroshi Nakashima; Yukimitsu Nakagawa; Shio Makino 📂 Article 📅 1981 🏛 Elsevier Science 🌐 English ⚖ 591 KB