𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Hardware Acceleration of HMMER on FPGAs

✍ Scribed by Steven Derrien; Patrice Quinton


Book ID
106559520
Publisher
Springer US
Year
2008
Tongue
English
Weight
525 KB
Volume
58
Category
Article
ISSN
1939-8018

No coin nor oath required. For personal study only.


πŸ“œ SIMILAR VOLUMES


Integrating FPGA acceleration into HMMer
✍ Tim Oliver; Leow Yuan Yeow; Bertil Schmidt πŸ“‚ Article πŸ“… 2008 πŸ› Elsevier Science 🌐 English βš– 400 KB

HMMer is a commonly used package for biological sequence database searching with profile hidden Markov model (HMMs). It allows researchers to compare HMMs to sequence databases or sequences to HMM databases. However, such searches often take many hours on traditional computer architectures. These ru

MPI-HMMER-Boost: Distributed FPGA Accele
✍ Walters, John Paul ;Meng, Xiandong ;Chaudhary, Vipin ;Oliver, Tim ;Yeow, Leow Yu πŸ“‚ Article πŸ“… 2007 πŸ› Springer 🌐 English βš– 618 KB
Hardware accelerated FPGA placement
✍ Christian Fobel; Gary GrΓ©wal; Andrew Morton πŸ“‚ Article πŸ“… 2009 πŸ› Elsevier Science 🌐 English βš– 283 KB