The formation, particle size distribution, structure and retention of aggregates were studied in a riverlake system of the lowland River Spree and factors influencing these processes were evaluated. Samples were taken from the inflow and outflow of a flushed lake, as well as along the adjacent flowing reach of the River Spree, between April 2001 and May 2002. The aim was to record the influence of the seasons and different turbulence intensities on the size, shape, composition, abundance and transport properties of the particles. As additional parameters, the phytoplankton biomass, the concentration of suspended particulate matter, the concentrations of nutrients and the discharge were measured. The abundance of the particles showed a strong seasonality in the investigated period, which closely correlated with the concentrations of suspended particulate matter and particulate organic matter in the water column. The organic carbon content of the suspended matter varied between 37% (dry weight) in summer and about 14% in winter. The concentration of particles ranged between 500 and 2500 particles/ml. The number of particles was significantly lower upstream from the lake than at the downstream transects. The majority of the aggregates in the River Spree were smaller than 500 µm, most of the particles even showing a diameter less than 50 µm. Many particles, above all algae, were washed out of the lake Neuendorfer See into the adjacent flowing reach of the River Spree. Algae influenced the abundance of the particles and contributed to the formation of aggregates with their stickiness. In the river flowing section large particles were formed by turbulence structures, whilst simultaneously the number of smaller particles decreased in the water column caused by aggregation processes. In general, an increasing flow velocity and discharge rate resulted in a larger amount of aggregates in the water column. On the other hand, particle abundance was reduced in the flow direction when the flow velocity was low. Under these conditions particles were retained by sedimentation and benthic filter-feeding.