Fluorodeoxy Sugar Analogues of 2′,5′-Oligoadenylates as Probes of Hydrogen Bonding in Enzymes of the 2-5A System
✍ Scribed by T. Kovacs; A. Pabuccuoglu; K. Lesiak; P.F. Torrence
- Publisher
- Elsevier Science
- Year
- 1993
- Tongue
- English
- Weight
- 886 KB
- Volume
- 21
- Category
- Article
- ISSN
- 0045-2068
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✦ Synopsis
In order to understand further the contribution of the 3'-hydroxyl groups of 2-5A (ppps'(A2'p) ({ }_{n} A) ) to its interaction with RNase (L). we synthesized a series of analogues in which the (3^{\prime}) '-hydroxyl moiety was replaced by fluorine to yield 3 '-fluoro-3'-deoxyadenosine


sponding monophosphates. When these oligomers were evaluated for their ability to activate RNase L from various sources, we found that the replacement of the second from the (5^{\circ}). terminus adenosine residue of (2-5 \mathrm{~A}) with the fluoro analogue caused major reductions in activity. We conclude that the hydroxyl group of this second or middle nucleotide residue of 2-5A trimer maly act as a hydrogen bond donor to an acceptor group in RNase L and that this hydrogen bond may be key to what we presume may be a critical conformational change required for nuclease activity of RNase (\mathrm{L}). We have also found that this substitution of fluorine for hydroxyl in the second or penultimate residue of 2-5A trimer results in an oligomer with a (2^{\prime}, 5^{\prime})-phosphodiesterase sensitivity comparable to that of (2-5) A itself. When viewed in terms of earlier experiments, these results suggest that the role of the (3^{\prime}-\mathrm{OH}) group of the penultimate nucleotide of (2-5) A may be to anchor the substrate to the phosphodiesterase through its action as a hydrogen bond receptor. ( 1993 A Aademic Prew. Inc.
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