Exploiting evolutionary relationships for predicting protein structures
β Scribed by Anna Tramontano; Veronica Morea
- Publisher
- John Wiley and Sons
- Year
- 2003
- Tongue
- English
- Weight
- 416 KB
- Volume
- 84
- Category
- Article
- ISSN
- 0006-3592
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The protein sequence database was analyzed for evidence that some distinct sequence families might be distantly related in evolution by changes in frame of translation. Sequences were compared using special amino acid substitution matrices for the alternate frames of translation. The statistical sig
## Background To discover remote evolutionary relationships and functional similarities between proteins, biologists rely on comparative sequence analysis, and when structures are available, on structural alignments and various measures of structural similarity. The measures/scores that have most c
## Abstract Knowledge of structural classes is useful in understanding of folding patterns in proteins. Although existing structural class prediction methods applied virtually all stateβofβtheβart classifiers, many of them use a relatively simple protein sequence representation that often includes