Dynamics and conformation of polypeptides
β Scribed by V. D. Gupta
- Book ID
- 104580326
- Publisher
- John Wiley and Sons
- Year
- 1981
- Tongue
- English
- Weight
- 590 KB
- Volume
- 20
- Category
- Article
- ISSN
- 0020-7608
No coin nor oath required. For personal study only.
β¦ Synopsis
Abstract
The dynamics of simple polypeptides is studied both from theoretical and experimental viewpoints. Theoretically, dispersion curves and frequency distributions are obtained from Wilson's GF matrix method as modified by Higgs for an infinite helical system. The systems studied are polyglycine I and polyglycine II, polyalanine in Ξ± and Ξ± forms, polyβLβproline I and polyβLβproline II, and polyβLβhydroxyproline. Conformation sensitive modes and their dispersion in the BZ are reported. In several of these, the results are compared with the measurements from inelastic neutron scattering. Since the neutrons have a large incoherent scattering cross section for hydrogen, it enables us to examine a normal mode via the motion of protons involved. In addition, neutron scattering is not controlled by symmetry dependent βselection rules.β Conformational studies of oligomers of glycine, alanine, and proline in relation to their polymeric forms as deduced from the dispersion curves and spectroscopic studies are presented. Recent measurements on the specific heat of polyglycine and polyalanine by Finegold et al. are also reported.
π SIMILAR VOLUMES
A significant fraction of the socalled ''random coil'' residues in globular proteins exists in the left-handed poly(Pro)II conformation. In order to compare the behavior of this secondary structure with that of the other regular secondary structures, molecular dynamics simulations, with the GROMOS s