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Dynamics and conformation of polypeptides

✍ Scribed by V. D. Gupta


Book ID
104580326
Publisher
John Wiley and Sons
Year
1981
Tongue
English
Weight
590 KB
Volume
20
Category
Article
ISSN
0020-7608

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✦ Synopsis


Abstract

The dynamics of simple polypeptides is studied both from theoretical and experimental viewpoints. Theoretically, dispersion curves and frequency distributions are obtained from Wilson's GF matrix method as modified by Higgs for an infinite helical system. The systems studied are polyglycine I and polyglycine II, polyalanine in Ξ± and Ξ± forms, poly‐L‐proline I and poly‐L‐proline II, and poly‐L‐hydroxyproline. Conformation sensitive modes and their dispersion in the BZ are reported. In several of these, the results are compared with the measurements from inelastic neutron scattering. Since the neutrons have a large incoherent scattering cross section for hydrogen, it enables us to examine a normal mode via the motion of protons involved. In addition, neutron scattering is not controlled by symmetry dependent β€œselection rules.” Conformational studies of oligomers of glycine, alanine, and proline in relation to their polymeric forms as deduced from the dispersion curves and spectroscopic studies are presented. Recent measurements on the specific heat of polyglycine and polyalanine by Finegold et al. are also reported.


πŸ“œ SIMILAR VOLUMES


Molecular dynamics simulations of polype
✍ Narasimha Sreerama; Robert W. Woody πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 224 KB πŸ‘ 2 views

A significant fraction of the socalled ''random coil'' residues in globular proteins exists in the left-handed poly(Pro)II conformation. In order to compare the behavior of this secondary structure with that of the other regular secondary structures, molecular dynamics simulations, with the GROMOS s