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Docking small-molecule ligands into active sites

✍ Scribed by Gareth Jones; Peter Willett


Book ID
103978765
Publisher
Elsevier Science
Year
1995
Tongue
English
Weight
358 KB
Volume
6
Category
Article
ISSN
0958-1669

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✦ Synopsis


Docking involves the development of computer algorithms that evaluate the binding modes of putative ligands in receptor sites. The principal advances of the past year have been the development of new algorithmic approaches, several of which incorporate conformational flexibility, and the increased use of docking to identify leads in drug-discovery programmes.


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Docking small ligands in flexible bindin
✍ Apostolakis, Joannis; PlοΏ½ckthun, Andreas; Caflisch, Amedeo πŸ“‚ Article πŸ“… 1998 πŸ› John Wiley and Sons 🌐 English βš– 404 KB πŸ‘ 1 views

A novel procedure for docking ligands in a flexible binding site is presented. It relies on conjugate gradient minimization, during which nonbonded interactions are gradually switched on. Short Monte Carlo minimization runs are performed on the most promising candidates. Solvation is implicitly take