actants is used to compute the time evolution of reactant concentrations. The stochastic algorithm is rigorous in the The stochastic time evolution method has been used previously to study non-linear chemical reaction processes in well-stirred ho-sense that it provides an exact solution to the corr
Diffusion Approximation of the Stochastic Process of Microtubule Assembly
β Scribed by Ivan V. Maly
- Publisher
- Springer
- Year
- 2002
- Tongue
- English
- Weight
- 311 KB
- Volume
- 64
- Category
- Article
- ISSN
- 1522-9602
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β¦ Synopsis
Microtubules are protein polymers that guide intracellular motility. Stochastic switching of a microtubule between states of elongation, shortening, and pause is described in detail by the dynamic instability (DI) model. Recently we have described the dynamics of microtubules phenomenologically as generalized diffusion of their ends. Genesis of the diffusion dynamics and accuracy of diffusion model are studied in this work. It is shown that wandering of the end of a microtubule undergoing DI asymptotically approaches the Wiener diffusion process. Accuracy of the diffusion approximation is evaluated by comparing its predictions with results of simulation of DI. Stationary distributions of microtubule length and lifetime that are predicted by both models differ qualitatively between two cell types considered. However, predictions of the diffusion model are in each case practically identical to predictions of the DI model being also consistent with experimental data. The peculiar stochastic process of microtubule assembly thus converges at cell scale to a kind of widespread-in-nature diffusion process. This result is considered an example of qualitative change in dynamical properties in transition from the molecular to cellular level of biological organization. Additionally, it suggests employment of diffusion process theory in studying functions of microtubules in the cell.
π SIMILAR VOLUMES
Near-and far-uv CD spectra of microtubule protein preparations have been examined to study the possible role of protein conformation in relation to the kinetics of the self-assembly of these proteins into microtubules in uitro. Although tubulin can form conformations with high helical content under