𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Detection of Homologous Recombination among Bacteriophage P2 Relatives

✍ Scribed by Anders S. Nilsson; Elisabeth Haggård-Ljungquist


Book ID
102614899
Publisher
Elsevier Science
Year
2001
Tongue
English
Weight
166 KB
Volume
21
Category
Article
ISSN
1055-7903

No coin nor oath required. For personal study only.

✦ Synopsis


Sequencing of five late genes from 18 isolates of P2-like bacteriophages showed that these are at least 96% identical to the genes of phage P2. A maximum-parsimony phylogenetic analysis of these genes showed excess homoplasy of a magnitude three to six times higher than that expected. Examination of the distribution of the number of homoplasies at parsimoniously informative sites and incompatibility matrices of such sites revealed a pattern typical for extensive recombination. It has been shown that phage P2 probably incorporated some functionally complete genes or gene modules by recombination with other phages or with different hosts, but homologous recombination within genes has previously not been shown. In this paper we demonstrate that homologous recombination between P2-like bacteriophages occurs randomly at multiple breakpoints in five late genes. The rate of recombination is high but, since some phages were sampled decades apart and in different parts of the world, this has to be viewed on an evolutionary time scale. The applicability of different methods used for detection of recombination breakpoints and estimation of rates of recombination in bacteriophages is discussed.


📜 SIMILAR VOLUMES