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Copolymers containing alternating sequences of nucleic acid base pairs. III. Spectroscopic studies

✍ Scribed by Aponte, Maria A. ;Butler, George B.


Book ID
105335408
Publisher
John Wiley and Sons
Year
1984
Weight
699 KB
Volume
22
Category
Article
ISSN
0360-6376

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✦ Synopsis


Abstract

A study was conducted of the complementary base pair interactions between various pairs of electron‐donor monomers, electron‐acceptor monomers, homopolymers and alternating copolymers selected from the following group: (1) 9‐(2‐vinyloxyethyl)adenine; (2) 1‐(2‐vinyloxyethyl)thymine; (3) 1‐(2‐vinyloxyethyl)cytosine; (4) 9‐(2‐maleimidoethyl)adenine; (5) 6‐chloro‐9‐(2‐maleimidoethyl)purine; (6) 1‐(2‐maleimidoethyl)thymine; (7) 1‐(2‐maleimidoethyl)cytosine; (8) homopolymer of (4); (9) homopolymer of (6); (10) alternating copolymer of (2) and maleic anhydride; (11) alternating copolymer of (2) and (5); and (12) alternating copolymer of (2) and (4). By ^1^H‐NMR, in CDCL~3~, the base pair interactions between (1) and (2) were shown to be hydrogen bonding, the extent of which was shown by a calculated binding constant, K = 61.81 L/mol. The nature of this interaction was conformed by IR. Neither monomer pairs (1)/(2) nor (4)/(6) exhibited hydrogen bonding in DMSO‐d~6~. However, hydrogen bonding interaction was observed for DMSO‐d~6~ solutions of homopolymers (8) and (9) and for alternating copolymer (12). On the basis of an upfield chemical shift of the 2‐ and 8‐aromatic protons of ademine of (1) in D~2~O, a partial overlap stacking interaction is proposed. No charge‐transfer interactions could be observed by UV between donor‐acceptor monomer pairs.


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