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Contacts Between Ribosome Parts Refined by Molecular Dynamics Simulations

โœ Scribed by Blau, Christian; Bock, Lars V.; Schroeder, Gunnar F.; Fischer, Niels; Stark, Holger; Vaiana, Andrea C.; Grubmuller, Helmut

Book ID
119209681
Publisher
Biophysical Society
Year
2012
Tongue
English
Weight
37 KB
Volume
102
Category
Article
ISSN
0006-3495

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## Abstract This article presents a comparative analysis of two replicaโ€exchange simulation methods for the structure refinement of protein loop conformations, starting from lowโ€resolution predictions. The methods are selfโ€guided Langevin dynamics (SGLD) and molecular dynamics (MD) with a Nosรฉโ€“Hoov