𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Comparison of methods for estimating the nucleotide substitution matrix

✍ Scribed by Maribeth Oscamou; Daniel McDonald; Von Bing Yap; Gavin A Huttley; Manuel E Lladser; Rob Knight


Book ID
115001514
Publisher
BioMed Central
Year
2008
Tongue
English
Weight
415 KB
Volume
9
Category
Article
ISSN
1471-2105

No coin nor oath required. For personal study only.


πŸ“œ SIMILAR VOLUMES


Estimating the pattern of nucleotide sub
✍ Ziheng Yang πŸ“‚ Article πŸ“… 1994 πŸ› Springer 🌐 English βš– 733 KB

Knowledge of the pattern of nucleotide substitution is important both to our understanding of molecular sequence evolution and to reliable estimation of phylogenetic relationships. The method of parsimony analysis, which has been used to estimate substitution patterns in real sequences, has serious

Evaluation of several methods for estima
✍ Ziheng Yang πŸ“‚ Article πŸ“… 1995 πŸ› Springer 🌐 English βš– 945 KB

Several maximum likelihood and distance matrix methods for estimating phylogenetic trees from homologous DNA sequences were compared when substitution rates at sites were assumed to follow a gamma distribution. Computer simulations were performed to estimate the probabilities that various tree estim