𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Coarse-grained protein molecular dynamics simulations

✍ Scribed by Derreumaux, Philippe; Mousseau, Normand


Book ID
115507065
Publisher
American Institute of Physics
Year
2007
Tongue
English
Weight
579 KB
Volume
126
Category
Article
ISSN
0021-9606

No coin nor oath required. For personal study only.


πŸ“œ SIMILAR VOLUMES


Large-scale comparison of protein essent
✍ Aqeel Ahmed; Saskia Villinger; Holger Gohlke πŸ“‚ Article πŸ“… 2010 πŸ› John Wiley and Sons 🌐 English βš– 293 KB

## Abstract A large‐scale comparison of essential dynamics (ED) modes from molecular dynamic simulations and normal modes from coarse‐grained normal mode methods (CGNM) was performed on a dataset of 335 proteins. As CGNM methods, the elastic network model (ENM) and the rigid cluster normal mode ana

IBIsCO: A molecular dynamics simulation
✍ Hossein Ali Karimi-Varzaneh; Hu-Jun Qian; Xiaoyu Chen; Paola Carbone; Florian MΓΌ πŸ“‚ Article πŸ“… 2011 πŸ› John Wiley and Sons 🌐 English βš– 501 KB

## Abstract IBIsCO is a parallel molecular dynamics simulation package developed specially for coarse‐grained simulations with numerical potentials derived by the iterative Boltzmann inversion (IBI) method (Reith et al., J Comput Chem 2003, 24, 1624). In addition to common features of molecular dyn