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Chain conformation in polyretropeptides III: Design of a 310 helix using α,α-dialkylated amino acids and retropeptide bonds

✍ Scribed by Carlos Alemán


Publisher
John Wiley and Sons
Year
1997
Tongue
English
Weight
139 KB
Volume
29
Category
Article
ISSN
0887-3585

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✦ Synopsis


Computer simulations have been used to design a polypeptide with a 3 10 helix conformation. The study has been been performed taking advantage of the intrinsic helix forming tendency of ␣-Aminoisobutyric acid. In order to avoid the formation of the ␣ helix, which is the other common helical conformation adopted by ␣-Aminoisobutyric acidbased peptides, retropeptide bonds have been included in the sequence. Thus, retropeptides are not able to form the intramolecular hydrogen bonding interactions characteristic of the ␣ helix. The influences of both the peptide length and the solvent have been examined and compared with those of the polypeptide without retropeptide bonds. Proteins