๐”– Bobbio Scriptorium
โœฆ   LIBER   โœฆ

Biophysical applications of molecular dynamics

โœ Scribed by H.J.C. Berendsen


Publisher
Elsevier Science
Year
1987
Tongue
English
Weight
1022 KB
Volume
44
Category
Article
ISSN
0010-4655

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โœฆ Synopsis


A survey is given of the computer simulation method of Molecular Dynamics, as applied to complex molecular systems of biological interest. Possibilities and limitations of the method are discussed, with special emphasis on the derivation of free energy from simulations. The prediction of the free energy of binding of an inhibitor to an enzyme is discussed as an example of the application of simulation methods in the field of drug design.


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to the one taken in MD. In particular, they describe the linked-cell method of distributing computation in molecular dynamics simulations. As in MD, the linkedcell method assigns particles to processors based on their location in three-dimensional cells (domains in MD) of size greater or equal to cu