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Acceleration of cardiac tissue simulation with graphic processing units

✍ Scribed by Daisuke Sato; Yuanfang Xie; James N. Weiss; Zhilin Qu; Alan Garfinkel; Allen R. Sanderson


Book ID
107383616
Publisher
Springer
Year
2009
Tongue
English
Weight
372 KB
Volume
47
Category
Article
ISSN
1741-0444

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Accelerating molecular dynamic simulatio
✍ Mark S. Friedrichs; Peter Eastman; Vishal Vaidyanathan; Mike Houston; Scott Legr πŸ“‚ Article πŸ“… 2009 πŸ› John Wiley and Sons 🌐 English βš– 624 KB

## Abstract We describe a complete implementation of all‐atom protein molecular dynamics running entirely on a graphics processing unit (GPU), including all standard force field terms, integration, constraints, and implicit solvent. We discuss the design of our algorithms and important optimization