## Abstract Genomeβwide model free linkage analysis was conducted for nicotine dependence and tobacco use phenotypes in 607 members of 158 nuclear families consisting of at least two ever smokers (100 or more cigarettes smoked in lifetime). DNA from whole blood was genotyped for 739 autosomal micro
A two-stage, genome-wide screen for susceptibility loci in primary Raynaud's phenomenon
β Scribed by Elene Susol; Alexander J. MacGregor; Jennifer H. Barrett; Helen Wilson; Carol Black; Ken Welsh; Alan Silman; Bill Ollier; Jane Worthington
- Publisher
- John Wiley and Sons
- Year
- 2000
- Tongue
- English
- Weight
- 90 KB
- Volume
- 43
- Category
- Article
- ISSN
- 0004-3591
No coin nor oath required. For personal study only.
β¦ Synopsis
Objective. To identify chromosomal regions containing genes involved in the susceptibility to primary Raynaud's phenomenon (RP).
Methods. Six extended families with multiple individuals affected with primary RP (n β«Ψβ¬ 37) were examined for linkage in a 2-stage, whole-genome screen, using a total of 298 microsatellite markers.
Results. Multipoint, nonparametric linkage analysis identified 5 areas of possible linkage, with a nominal level of significance of P < 0.05. Analysis of a finer map of markers in these regions defined the regions of linkage as 21.4 cM on 6q13-6q23.3 (D6S261; P β«Ψβ¬ 0.0004), 10.2 cM on 7p22-7p15 (D7S664; P β«Ψβ¬ 0.014), 1.6 cM on 9p23-9p22 (D9S156; P β«Ψβ¬ 0.0075), 5.1 cM on 17p13.1-17p12 (D17S1791; P β«Ψβ¬ 0.036), and 11.8 cM on Xp11.4-Xp11.23 (DXS8054; P β«Ψβ¬ 0.006). Three potential candidate genes map to these regions: the β€ subunit of the muscle acetylcholine receptor and the serotonin 1B and 1E receptors.
Conclusion. These results provide evidence of the presence and location of genes that are involved in the genetic susceptibility to primary RP.
PATIENTS AND METHODS
Family ascertainment. Families (n Ο 39) with at least 3 individuals affected with primary RP were ascertained through a media campaign and patient societies in Great Britain. Six extended pedigrees that were British Caucasian in origin and comprised multiple affected individuals (n Ο 37; median age at primary RP onset 12.7 years) were used to Supported by the Arthritis Research Campaign and the Raynaud's and Scleroderma Association.
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