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A pedigree-based study of mitochondrial d-loop DNA sequence variation among Arabian horses

✍ Scribed by A T Bowling; A Del Valle; M Bowling


Book ID
104457299
Publisher
John Wiley and Sons
Year
2000
Tongue
English
Weight
394 KB
Volume
31
Category
Article
ISSN
0268-9146

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✦ Synopsis


Summary

Through DNA sequence comparisons of a mitochondrial d‐loop hypervariable region, we investigated matrilineal diversity for Arabian horses in the United States. Sixty‐two horses were tested. From published pedigrees they traced in the maternal line to 34 mares acquired primarily in the mid to late 19th century from nomadic Bedouin tribes. Compared with the reference sequence (GenBank X79547), these samples showed 27 haplotypes with altogether 31 base substitution sites within 397 bp of sequence. Based on examination of pedigrees from a random sampling of 200 horses in current studbooks of the Arabian Horse Registry of America, we estimated that this study defined the expected mtDNA haplotypes for at least 89% of Arabian horses registered in the US. The reliability of the studbook recorded maternal lineages of Arabian pedigrees was demonstrated by haplotype concordance among multiple samplings in 14 lines. Single base differences observed within two maternal lines were interpreted as representing alternative fixations of past heteroplasmy. The study also demonstrated the utility of mtDNA sequence studies to resolve historical maternity questions without access to biological material from the horses whose relationship was in question, provided that representatives of the relevant female lines were available for comparison. The data call into question the traditional assumption that Arabian horses of the same strain necessarily share a common maternal ancestry.


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Mitochondrial DNA from 49 Lipizzan horses representing 16 maternal lines from the original stud at Lipica was used for SSCP analysis and DNA sequencing. The SSCP analysis of the 444 bp long fragment of the d‐loop region extending from the __tRNAPro__ gene to the central conserved sequence block reve