A microscale model for the transport and coupled reaction of microbes and chemicals in an idealized two-dimensional porous media has been developed. This model includes the flow, transport, and bioreaction of nutrients, electron acceptors, and microbial cells in a saturated granular porous media. Th
A Microscale Model of Bacterial Swimming, Chemotaxis and Substrate Transport
โ Scribed by Robert Dillon; Lisa Fauci; Donald Gaver; III
- Publisher
- Elsevier Science
- Year
- 1995
- Tongue
- English
- Weight
- 895 KB
- Volume
- 177
- Category
- Article
- ISSN
- 0022-5193
No coin nor oath required. For personal study only.
โฆ Synopsis
In this paper, we introduce a mathematical and computational model at the microscale level of bacterial motility and chemotaxis coupled with the advection and diffusion of a biologically reacting substrate. The hydrodynamic interaction of a small bacterial population is explicitly modelled through the use of discrete representations of individual microbes. We use the immersed boundary method to couple microbial motion and the advection-diffusion of substrate with the full incompressible Navier-Stokes equations. Simulations using a preliminary two-dimensional model are presented, demonstrating the mutual dependence through the fluid media of several swimming bacteria. A run and tumble mechanism is introduced for simulating the chemotaxis of swimming bacteria.
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