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A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

✍ Scribed by Anne-Kathrin Schultz; Ming Zhang; Thomas Leitner; Carla Kuiken; Bette Korber; Burkhard Morgenstern; Mario Stanke


Book ID
115000371
Publisher
BioMed Central
Year
2006
Tongue
English
Weight
893 KB
Volume
7
Category
Article
ISSN
1471-2105

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A Markov model for HIV disease progressi
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Back-calculation is a widely used method to estimate HIV incidence rates, and is commonly based on times of AIDS diagnosis. Following up earlier work, we extend this method to also incorporate knowledge of times of HIV diagnosis (first positive test). This is achieved through the use of a Markov mod