## Abstract Nucleic acid secondary structure models usually exclude pseudoknots due to the difficulty of treating these nonnested structures efficiently in structure prediction and partition function algorithms. Here, the standard secondary structure energy model is extended to include the most phy
β¦ LIBER β¦
A dynamic programming algorithm for RNA structure prediction including pseudoknots
β Scribed by Elena Rivas; Sean R. Eddy
- Book ID
- 115629035
- Publisher
- Elsevier Science
- Year
- 1999
- Tongue
- English
- Weight
- 377 KB
- Volume
- 285
- Category
- Article
- ISSN
- 0022-2836
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The possibilities of using a genetic algorithm for the prediction of RNA secondary structure were investigated. The algorithm, using the procedure of stepwise selection of the most fit structures (similarly to natural evolution), allows different models of fitness or driving forces determining RNA s